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» Microarray Gene Expression Data Analysis
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BMCBI
2008
107views more  BMCBI 2008»
15 years 2 months ago
A mixture model approach to sample size estimation in two-sample comparative microarray experiments
Background: Choosing the appropriate sample size is an important step in the design of a microarray experiment, and recently methods have been proposed that estimate sample sizes ...
Tommy S. Jørstad, Herman Midelfart, Atle M....
BMCBI
2010
154views more  BMCBI 2010»
14 years 11 months ago
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation
Background: External stimulations of cells by hormones, cytokines or growth factors activate signal transduction pathways that subsequently induce a re-arrangement of cellular gen...
Andreas Kowarsch, Florian Blöchl, Sebastian B...
98
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BMCBI
2007
117views more  BMCBI 2007»
15 years 2 months ago
Application of a correlation correction factor in a microarray cross-platform reproducibility study
Background: Recent research examining cross-platform correlation of gene expression intensities has yielded mixed results. In this study, we demonstrate use of a correction factor...
Kellie J. Archer, Catherine I. Dumur, G. Scott Tay...
138
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IJON
2006
95views more  IJON 2006»
15 years 2 months ago
Generalized relevance LVQ (GRLVQ) with correlation measures for gene expression analysis
A correlation-based similarity measure is derived for generalized relevance learning vector quantization (GRLVQ). The resulting GRLVQ-C classifier makes Pearson correlation availa...
Marc Strickert, Udo Seiffert, Nese Sreenivasulu, W...
BMCBI
2006
143views more  BMCBI 2006»
15 years 2 months ago
Discovering functional gene expression patterns in the metabolic network of Escherichia coli with wavelets transforms
Background: Microarray technology produces gene expression data on a genomic scale for an endless variety of organisms and conditions. However, this vast amount of information nee...
Rainer König, Gunnar Schramm, Marcus Oswald, ...