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BMCBI
2008
201views more  BMCBI 2008»
14 years 12 months ago
A copula method for modeling directional dependence of genes
Background: Genes interact with each other as basic building blocks of life, forming a complicated network. The relationship between groups of genes with different functions can b...
Jong-Min Kim, Yoon-Sung Jung, Engin A. Sungur, Kap...
RECOMB
2001
Springer
16 years 5 days ago
Context-specific Bayesian clustering for gene expression data
The recent growth in genomic data and measurements of genome-wide expression patterns allows us to apply computational tools to examine gene regulation by transcription factors. I...
Yoseph Barash, Nir Friedman
IJSI
2008
122views more  IJSI 2008»
14 years 12 months ago
Mining Gene Expression Data using Domain Knowledge
Biology is now an information-intensive science and various research areas, like molecular biology, evolutionary biology or environmental biology, heavily depend on the availabilit...
Nicolas Pasquier, Claude Pasquier, Laurent Brisson...
KDD
2005
ACM
130views Data Mining» more  KDD 2005»
16 years 8 days ago
Simple and effective visual models for gene expression cancer diagnostics
In the paper we show that diagnostic classes in cancer gene expression data sets, which most often include thousands of features (genes), may be effectively separated with simple ...
Gregor Leban, Minca Mramor, Ivan Bratko, Blaz Zupa...
IJKDB
2010
141views more  IJKDB 2010»
14 years 9 months ago
Mining Frequent Boolean Expressions: Application to Gene Expression and Regulatory Modeling
Regulatory network analysis and other bioinformatics tasks require the ability to induce and represent arbitrary boolean expressions from data sources. We introduce a novel framew...
Mohammed Javeed Zaki, Naren Ramakrishnan, Lizhuang...