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BMCBI
2005
153views more  BMCBI 2005»
14 years 9 months ago
A comparative review of estimates of the proportion unchanged genes and the false discovery rate
Background: In the analysis of microarray data one generally produces a vector of p-values that for each gene give the likelihood of obtaining equally strong evidence of change by...
Per Broberg
BIOINFORMATICS
2005
110views more  BIOINFORMATICS 2005»
14 years 9 months ago
Classification of oligonucleotide fingerprints: application for microbial community and gene expression analyses
Oligonucleotide fingerprinting is an array-based approach used for analysis of microbial community composition and gene expression profiling. Oligonucleotide fingerprinting of rib...
Katechan Jampachaisri, Lea Valinsky, James Bornema...
APIN
2010
108views more  APIN 2010»
14 years 10 months ago
A low variance error boosting algorithm
Abstract. This paper introduces a robust variant of AdaBoost, cwAdaBoost, that uses weight perturbation to reduce variance error, and is particularly effective when dealing with da...
Ching-Wei Wang, Andrew Hunter
BMCBI
2010
132views more  BMCBI 2010»
14 years 9 months ago
Consistency, comprehensiveness, and compatibility of pathway databases
Background: It is necessary to analyze microarray experiments together with biological information to make better biological inferences. We investigate the adequacy of current bio...
Donny Soh, Difeng Dong, Yike Guo, Limsoon Wong
BMCBI
2004
87views more  BMCBI 2004»
14 years 9 months ago
Selection of informative clusters from hierarchical cluster tree with gene classes
Background: A common clustering method in the analysis of gene expression data has been hierarchical clustering. Usually the analysis involves selection of clusters by cutting the...
Petri Törönen