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BMCBI
2007
109views more  BMCBI 2007»
14 years 9 months ago
Discarding duplicate ditags in LongSAGE analysis may introduce significant error
Background: During gene expression analysis by Serial Analysis of Gene Expression (SAGE), duplicate ditags are routinely removed from the data analysis, because they are suspected...
Jeppe Emmersen, Anna M. Heidenblut, Annabeth Laurs...
HICSS
2008
IEEE
215views Biometrics» more  HICSS 2008»
14 years 10 months ago
Harry Potter and the Meat-Filled Freezer: A Case Study of Spontaneous Usage of Visualization Tools
This paper is a report on early user activity in Many Eyes, a public web site where users may upload data, create visualizations, and carry on discussions. Since the site launched...
Fernanda B. Viégas, Martin Wattenberg, Matt...
DILS
2005
Springer
15 years 3 months ago
Hybrid Integration of Molecular-Biological Annotation Data
: We present a new approach to integrate annotation data from public sources for the expression analysis of genes and proteins. Expression data is materialized in a data warehouse ...
Toralf Kirsten, Hong Hai Do, Christine Körner...
BMCBI
2011
14 years 1 months ago
SeqGene: a comprehensive software solution for mining exome- and transcriptome- sequencing data
Background: The popularity of massively parallel exome and transcriptome sequencing projects demands new data mining tools with a comprehensive set of features to support a wide r...
Xutao Deng
BMCBI
2005
122views more  BMCBI 2005»
14 years 9 months ago
A microarray data-based semi-kinetic method for predicting quantitative dynamics of genetic networks
Background: Elucidating the dynamic behaviour of genetic regulatory networks is one of the most significant challenges in systems biology. However, conventional quantitative predi...
Katsuyuki Yugi, Yoichi Nakayama, Shigen Kojima, To...