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BMCBI
2010
143views more  BMCBI 2010»
15 years 3 months ago
An efficient biological pathway layout algorithm combining grid-layout and spring embedder for complicated cellular location inf
Background: Graph drawing is one of the important techniques for understanding biological regulations in a cell or among cells at the pathway level. Among many available layout al...
Kaname Kojima, Masao Nagasaki, Satoru Miyano
BMCBI
2010
202views more  BMCBI 2010»
15 years 3 months ago
NeMo: Network Module identification in Cytoscape
Background: As the size of the known human interactome grows, biologists increasingly rely on computational tools to identify patterns that represent protein complexes and pathway...
Corban G. Rivera, Rachit Vakil, Joel S. Bader
131
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BMCBI
2007
130views more  BMCBI 2007»
15 years 3 months ago
HMM-ModE - Improved classification using profile hidden Markov models by optimising the discrimination threshold and modifying e
Background: Profile Hidden Markov Models (HMM) are statistical representations of protein families derived from patterns of sequence conservation in multiple alignments and have b...
Prashant K. Srivastava, Dhwani K. Desai, Soumyadee...
BMCBI
2008
96views more  BMCBI 2008»
15 years 3 months ago
A PATO-compliant zebrafish screening database (MODB): management of morpholino knockdown screen information
Background: The zebrafish is a powerful model vertebrate amenable to high throughput in vivo genetic analyses. Examples include reverse genetic screens using morpholino knockdown,...
Michelle N. Knowlton, Tongbin Li, Yongliang Ren, B...
124
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CORR
2010
Springer
176views Education» more  CORR 2010»
15 years 3 months ago
Limited Feedback Multi-Antenna Quantization Codebook Design-Part I: Single-User Channels
Abstract--In this two-part paper, we study the design and optimization of limited feedback single-user and multiuser systems with a multiple-antenna base station and single-antenna...
Behrouz Khoshnevis, Wei Yu