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» Mining Gene Expression Data using Domain Knowledge
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BMCBI
2010
154views more  BMCBI 2010»
14 years 9 months ago
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation
Background: External stimulations of cells by hormones, cytokines or growth factors activate signal transduction pathways that subsequently induce a re-arrangement of cellular gen...
Andreas Kowarsch, Florian Blöchl, Sebastian B...
PAAPP
2007
109views more  PAAPP 2007»
14 years 11 months ago
Relation rule mining
\Web users are nowadays confronted with the huge variety of available information sources whose content is not targeted at any specific group or layer. Recommendation systems aim...
Mehdi Adda, Rokia Missaoui, Petko Valtchev
BMCBI
2010
135views more  BMCBI 2010»
14 years 12 months ago
Lists2Networks: Integrated analysis of gene/protein lists
Background: Systems biologists are faced with the difficultly of analyzing results from large-scale studies that profile the activity of many genes, RNAs and proteins, applied in ...
Alexander Lachmann, Avi Ma'ayan
BMCBI
2004
144views more  BMCBI 2004»
14 years 11 months ago
PASBio: predicate-argument structures for event extraction in molecular biology
Background: The exploitation of information extraction (IE), a technology aiming to provide instances of structured representations from free-form text, has been rapidly growing w...
Tuangthong Wattarujeekrit, Parantu K. Shah, Nigel ...
ISBRA
2007
Springer
15 years 6 months ago
GFBA: A Biclustering Algorithm for Discovering Value-Coherent Biclusters
Clustering has been one of the most popular approaches used in gene expression data analysis. A clustering method is typically used to partition genes according to their similarity...
Xubo Fei, Shiyong Lu, Horia F. Pop, Lily R. Liang