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TREC
2007
15 years 26 days ago
Information Retrieval and Information Extraction in TREC Genomics 2007
In TREC Genomics a question/answering task has been proposed. A set of questions with a specific entity of interest is proposed and a set of passages from a collection of full te...
Antonio Jimeno-Yepes, Piotr Pezik
BMCBI
2008
142views more  BMCBI 2008»
14 years 11 months ago
Microarray data mining: A novel optimization-based approach to uncover biologically coherent structures
Background: DNA microarray technology allows for the measurement of genome-wide expression patterns. Within the resultant mass of data lies the problem of analyzing and presenting...
Meng Piao Tan, Erin N. Smith, James R. Broach, Chr...
EDBT
2008
ACM
166views Database» more  EDBT 2008»
15 years 11 months ago
OrthoCluster: a new tool for mining synteny blocks and applications in comparative genomics
By comparing genomes among both closely and distally related species, comparative genomics analysis characterizes structures and functions of different genomes in both conserved a...
Xinghuo Zeng, Matthew J. Nesbitt, Jian Pei, Ke Wan...
KDD
2004
ACM
237views Data Mining» more  KDD 2004»
16 years 3 days ago
Bayesian Model-Averaging in Unsupervised Learning From Microarray Data
Unsupervised identification of patterns in microarray data has been a productive approach to uncovering relationships between genes and the biological process in which they are in...
Mario Medvedovic, Junhai Guo
BMCBI
2004
211views more  BMCBI 2004»
14 years 11 months ago
GenomeViz: visualizing microbial genomes
Background: An increasing number of microbial genomes are being sequenced and deposited in public databases. In addition, several closely related strains are also being sequenced ...
Rohit Ghai, Torsten Hain, Trinad Chakraborty