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» Mining protein networks for synthetic genetic interactions
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IS
2010
14 years 10 months ago
Tree pattern mining with tree automata constraints
Most work on pattern mining focuses on simple data structures such as itemsets and sequences of itemsets. However, a lot of recent applications dealing with complex data like chem...
Sandra de Amo, Nyara A. Silva, Ronaldo P. Silva, F...
CIBCB
2008
IEEE
15 years 6 months ago
Very large scale ReliefF for genome-wide association analysis
— The genetic causes of many monogenic diseases have already been discovered. However, most common diseases are actually the result of complex nonlinear interactions between mult...
Margaret J. Eppstein, Paul Haake
BMCBI
2007
127views more  BMCBI 2007»
14 years 12 months ago
Characterization of protein-interaction networks in tumors
Background: Analyzing differential-gene-expression data in the context of protein-interaction networks (PINs) yields information on the functional cellular status. PINs can be for...
Alexander Platzer, Paul Perco, Arno Lukas, Bernd M...
BMCBI
2011
14 years 6 months ago
Learning genetic epistasis using Bayesian network scoring criteria
Background: Gene-gene epistatic interactions likely play an important role in the genetic basis of many common diseases. Recently, machine-learning and data mining methods have be...
Xia Jiang, Richard E. Neapolitan, M. Michael Barma...
ICDM
2007
IEEE
197views Data Mining» more  ICDM 2007»
15 years 6 months ago
Trend Motif: A Graph Mining Approach for Analysis of Dynamic Complex Networks
Complex networks have been used successfully in scientific disciplines ranging from sociology to microbiology to describe systems of interacting units. Until recently, studies of...
Ruoming Jin, Scott McCallen, Eivind Almaas