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» Mining protein networks for synthetic genetic interactions
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111
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WAW
2004
Springer
178views Algorithms» more  WAW 2004»
15 years 2 months ago
Communities Detection in Large Networks
We develop an algorithm to detect community structure in complex networks. The algorithm is based on spectral methods and takes into account weights and links orientations. Since t...
Andrea Capocci, Vito Domenico Pietro Servedio, Gui...
BMCBI
2007
165views more  BMCBI 2007»
14 years 9 months ago
Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
Carlos Rodríguez Penagos, Heladia Salgado, ...
ICDM
2010
IEEE
232views Data Mining» more  ICDM 2010»
14 years 6 months ago
gSkeletonClu: Density-Based Network Clustering via Structure-Connected Tree Division or Agglomeration
Community detection is an important task for mining the structure and function of complex networks. Many pervious approaches are difficult to detect communities with arbitrary size...
Heli Sun, Jianbin Huang, Jiawei Han, Hongbo Deng, ...
122
Voted
BMCBI
2008
160views more  BMCBI 2008»
14 years 9 months ago
Predicting cancer involvement of genes from heterogeneous data
Background: Systematic approaches for identifying proteins involved in different types of cancer are needed. Experimental techniques such as microarrays are being used to characte...
Ramon Aragues, Chris Sander, Baldo Oliva
BMCBI
2006
108views more  BMCBI 2006»
14 years 9 months ago
An improved map of conserved regulatory sites for Saccharomyces cerevisiae
Background: The regulatory map of a genome consists of the binding sites for proteins that determine the transcription of nearby genes. An initial regulatory map for S. cerevisiae...
Kenzie D. MacIsaac, Ting Wang, D. Benjamin Gordon,...