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BMCBI
2008
122views more  BMCBI 2008»
15 years 3 months ago
High-throughput bioinformatics with the Cyrille2 pipeline system
Background: Modern omics research involves the application of high-throughput technologies that generate vast volumes of data. These data need to be pre-processed, analyzed and in...
Mark W. E. J. Fiers, Ate van der Burgt, Erwin Date...
BIOINFORMATICS
2008
172views more  BIOINFORMATICS 2008»
15 years 3 months ago
Fitting a geometric graph to a protein-protein interaction network
Motivation: Finding a good network null model for protein-protein interaction (PPI) networks is a fundamental issue. Such a model would provide insights into the interplay between...
Desmond J. Higham, Marija Rasajski, Natasa Przulj
CONSTRAINTS
2011
14 years 10 months ago
Dantzig-Wolfe decomposition and branch-and-price solving in G12
Abstract The G12 project is developing a software environment for stating and solving combinatorial problems by mapping a high-level model of the problem to an efficient combinatio...
Jakob Puchinger, Peter J. Stuckey, Mark G. Wallace...
OOPSLA
2007
Springer
15 years 9 months ago
IAnticorruption: a domain-driven design approach to more robust integration
Custom House's new currency exchange system is integrated with a legacy system. After a few years of growth, the two systems were so intricately tangled that even small chang...
Sam Peng, Ying Hu
FMCAD
2009
Springer
15 years 6 months ago
Industrial strength refinement checking
This paper discusses a methodology used on an industrial hardware development project to validate various cache-coherence protocol components. The idea is to use a high level model...
Jesse D. Bingham, John Erickson, Gaurav Singh, Fle...