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SIGSOFT
2004
ACM
16 years 1 months ago
Merging partial behavioural models
Constructing comprehensive operational models of intended system behaviour is a complex and costly task. Consequently, practitioners have adopted techniques that support increment...
Marsha Chechik, Sebastián Uchitel
BMCBI
2007
100views more  BMCBI 2007»
15 years 1 months ago
SBMLeditor: effective creation of models in the Systems Biology Markup Language (SBML)
Background: The need to build a tool to facilitate the quick creation and editing of models encoded in the Systems Biology Markup language (SBML) has been growing with the number ...
Nicolas Rodriguez, Marco Donizelli, Nicolas Le Nov...
TCBB
2011
14 years 8 months ago
Semantics and Ambiguity of Stochastic RNA Family Models
Stochastic models such as hidden Markov models or stochastic context free grammars can fail to return the correct, maximum likelihood solution in the case of semantic ambiguity. T...
Robert Giegerich, Christian Höner zu Siederdi...
JUCS
2010
215views more  JUCS 2010»
14 years 8 months ago
A Multidisciplinary Survey of Computational Techniques for the Modelling, Simulation and Analysis of Biochemical Networks
: All processes of life are controlled by networks of interacting biochemical components. The purpose of modelling these networks is manifold. From a theoretical point of view it a...
James Decraene, Thomas Hinze
FM
2008
Springer
152views Formal Methods» more  FM 2008»
15 years 2 months ago
Constraint Prioritization for Efficient Analysis of Declarative Models
The declarative modeling language Alloy and its automatic analyzer provide an effective tool-set for building designs of systems and checking their properties. The Alloy Analyzer p...
Engin Uzuncaova, Sarfraz Khurshid