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BMCBI
2007
153views more  BMCBI 2007»
15 years 4 months ago
A new pairwise kernel for biological network inference with support vector machines
Background: Much recent work in bioinformatics has focused on the inference of various types of biological networks, representing gene regulation, metabolic processes, protein-pro...
Jean-Philippe Vert, Jian Qiu, William Stafford Nob...
ICONIP
2007
15 years 5 months ago
Natural Conjugate Gradient in Variational Inference
Variational methods for approximate inference in machine learning often adapt a parametric probability distribution to optimize a given objective function. This view is especially ...
Antti Honkela, Matti Tornio, Tapani Raiko, Juha Ka...
UAI
2008
15 years 5 months ago
Learning Arithmetic Circuits
Graphical models are usually learned without regard to the cost of doing inference with them. As a result, even if a good model is learned, it may perform poorly at prediction, be...
Daniel Lowd, Pedro Domingos
MLG
2007
Springer
15 years 10 months ago
Inferring Vertex Properties from Topology in Large Networks
: Network topology not only tells about tightly-connected “communities,” but also gives cues on more subtle properties of the vertices. We introduce a simple probabilistic late...
Janne Sinkkonen, Janne Aukia, Samuel Kaski
ECCB
2003
IEEE
15 years 9 months ago
Gene networks inference using dynamic Bayesian networks
This article deals with the identification of gene regulatory networks from experimental data using a statistical machine learning approach. A stochastic model of gene interactio...
Bruno-Edouard Perrin, Liva Ralaivola, Aurél...