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» Modeling Functional Data Sources as Relations
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BMCBI
2008
184views more  BMCBI 2008»
15 years 1 months ago
Integrating protein-protein interactions and text mining for protein function prediction
Background: Functional annotation of proteins remains a challenging task. Currently the scientific literature serves as the main source for yet uncurated functional annotations, b...
Samira Jaeger, Sylvain Gaudan, Ulf Leser, Dietrich...
SDM
2011
SIAM
307views Data Mining» more  SDM 2011»
14 years 4 months ago
Block-LDA: Jointly modeling entity-annotated text and entity-entity links
We present a model that improves entity entity link modeling in a mixed membership stochastic block model, by jointly modeling links with text about the entities that are linked i...
Ramnath Balasubramanyan, William W. Cohen
ECOOP
2008
Springer
15 years 3 months ago
Extensible Universes for Object-Oriented Data Models
Abstract We present a datatype package that enables the shallow embedding technique to object-oriented specification and programming languages. This datatype package incrementally ...
Achim D. Brucker, Burkhart Wolff
101
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CEC
2010
IEEE
14 years 11 months ago
Comparison of GA and PSO performance in parameter estimation of microbial growth models: A case-study using experimental data
In this work we examined the performance of two evolutionary algorithms, a genetic algorithm (GA) and particle swarm optimization (PSO), in the estimation of the parameters of a mo...
Dulce Calcada, Agostinho Rosa, Luis C. Duarte, Vit...
FASE
2010
Springer
15 years 8 months ago
Analyzing the Impact of Change in Multi-threaded Programs
We introduce a technique for debugging multi-threaded C programs and analyzing the impact of source code changes, and its implementation in the prototype tool Direct. Our approach ...
Krishnendu Chatterjee, Luca de Alfaro, Vishwanath ...