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» Modeling Interactive Web Sources for Information Mediation
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BMCBI
2010
144views more  BMCBI 2010»
14 years 9 months ago
Identifying overrepresented concepts in gene lists from literature: a statistical approach based on Poisson mixture model
Background: Large-scale genomic studies often identify large gene lists, for example, the genes sharing the same expression patterns. The interpretation of these gene lists is gen...
Xin He, Moushumi Sen Sarma, Xu Ling, Brant W. Chee...
BMCBI
2004
177views more  BMCBI 2004»
14 years 9 months ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu
EUROCRYPT
1999
Springer
15 years 1 months ago
A Note on the Limits of Collusion-Resistant Watermarks
In one proposed use of digital watermarks, the owner of a document D sells slightly different documents, D1 , D2 , . . . to each buyer; if a buyer posts his/her document Di to the...
Funda Ergün, Joe Kilian, Ravi Kumar
BMCBI
2006
145views more  BMCBI 2006»
14 years 9 months ago
GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes
Background: Successful realization of a "systems biology" approach to analyzing cells is a grand challenge for our understanding of life. However, current modeling appro...
Kazuharu Arakawa, Yohei Yamada, Kosaku Shinoda, Yo...
KDD
2008
ACM
217views Data Mining» more  KDD 2008»
15 years 10 months ago
Stream prediction using a generative model based on frequent episodes in event sequences
This paper presents a new algorithm for sequence prediction over long categorical event streams. The input to the algorithm is a set of target event types whose occurrences we wis...
Srivatsan Laxman, Vikram Tankasali, Ryen W. White