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BMCBI
2008
106views more  BMCBI 2008»
14 years 10 months ago
Ontology Design Patterns for bio-ontologies: a case study on the Cell Cycle Ontology
Background: Bio-ontologies are key elements of knowledge management in bioinformatics. Rich and rigorous bio-ontologies should represent biological knowledge with high fidelity an...
Mikel Egaña Aranguren, Erick Antezana, Mart...
BMCBI
2006
120views more  BMCBI 2006»
14 years 10 months ago
Integrating protein structures and precomputed genealogies in the Magnum database: Examples with cellular retinoid binding prote
Background: When accurate models for the divergent evolution of protein sequences are integrated with complementary biological information, such as folded protein structures, anal...
Michael E. Bradley, Steven A. Benner
IANDC
2007
107views more  IANDC 2007»
14 years 9 months ago
Task automata: Schedulability, decidability and undecidability
We present a model, task automata, for real time systems with non-uniformly recurring computation tasks. It is an extended version of timed automata with asynchronous processes th...
Elena Fersman, Pavel Krcál, Paul Pettersson...
SIAMSC
2008
113views more  SIAMSC 2008»
14 years 9 months ago
An Efficient and Robust Method for Simulating Two-Phase Gel Dynamics
We develop a computational method for simulating models of gel dynamics where the gel is described by two phases, a networked polymer and a fluid solvent. The models consist of tra...
Grady B. Wright, Robert D. Guy, Aaron L. Fogelson
TASLP
2008
124views more  TASLP 2008»
14 years 9 months ago
Sparse Linear Regression With Structured Priors and Application to Denoising of Musical Audio
Abstract--We describe in this paper an audio denoising technique based on sparse linear regression with structured priors. The noisy signal is decomposed as a linear combination of...
Cédric Févotte, Bruno Torrésa...