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158
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BMCBI
2002
108views more  BMCBI 2002»
15 years 1 months ago
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
Sean R. Eddy
JGO
2008
101views more  JGO 2008»
15 years 1 months ago
Dynamic equilibria of group vaccination strategies in a heterogeneous population
Abstract In this paper we present an evolutionary variational inequality model of vaccination strategies games in a population with a known vaccine coverage profile over a certain ...
Monica-Gabriela Cojocaru
163
Voted
NAACL
2010
14 years 11 months ago
Dialogue-Oriented Review Summary Generation for Spoken Dialogue Recommendation Systems
In this paper we present an opinion summarization technique in spoken dialogue systems. Opinion mining has been well studied for years, but very few have considered its applicatio...
Jingjing Liu, Stephanie Seneff, Victor Zue
FLAIRS
2009
14 years 11 months ago
Analyzing Team Actions with Cascading HMM
While team action recognition has a relatively extended literature, less attention has been given to the detailed realtime analysis of the internal structure of the team actions. ...
Brandyn Allen White, Nate Blaylock, Ladislau B&oum...
145
Voted
BMCBI
2010
123views more  BMCBI 2010»
14 years 8 months ago
Predicting conserved protein motifs with Sub-HMMs
Background: Profile HMMs (hidden Markov models) provide effective methods for modeling the conserved regions of protein families. A limitation of the resulting domain models is th...
Kevin Horan, Christian R. Shelton, Thomas Girke
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