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» Modelling Coordination in Biological Systems
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SSDBM
2003
IEEE
123views Database» more  SSDBM 2003»
15 years 2 months ago
MoBIoS: A Metric-Space DBMS to Support Biological Discovery
MoBIoS is a specialized database management system whose storage manager is based on metric-space indexing, and whose query language entails biological data types. When relational...
Daniel P. Miranker, Weijia Xu, Rui Mao
ENTCS
2007
119views more  ENTCS 2007»
14 years 9 months ago
PML: Toward a High-Level Formal Language for Biological Systems
Documentation of knowledge about biological pathways is often informal and vague, making it difficult to efficiently synthesize the work of others into a holistic understanding of...
Bor-Yuh Evan Chang, Manu Sridharan
92
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DILS
2009
Springer
15 years 1 months ago
An Integration and Analysis Pipeline for Systems Biology in Crop Plant Metabolism
Abstract. To advance the comprehension of complex biological processes occurring in crop plants (e.g. for improvement of growth or yield) it is of high interest to reconstruct and ...
Stephan Weise, Christian Colmsee, Eva Grafahrend-B...
CORR
2007
Springer
110views Education» more  CORR 2007»
14 years 9 months ago
Computer algebra in systems biology
Systems biology focuses on the study of entire biological systems rather than on their individual components. With the emergence of high-throughput data generation technologies for...
Reinhard C. Laubenbacher, Bernd Sturmfels
FUIN
2010
103views more  FUIN 2010»
14 years 8 months ago
A Notion of Biological Diagnosability Inspired by the Notion of Opacity in Systems Security
A formal model for diagnostics of biological systems modelled as P systems is presented. We assume the presence of some biologically motivated changes (frequently pathological) in ...
Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo ...