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» Modelling Gene Regulatory Networks
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GCB
2004
Springer
113views Biometrics» more  GCB 2004»
15 years 3 months ago
Feature Based Representation and Detection of Transcription Factor Binding Sites
: The prediction of transcription factor binding sites is an important problem, since it reveals information about the transcriptional regulation of genes. A commonly used represen...
Rainer Pudimat, Ernst Günter Schukat-Talamazz...
ICANN
2010
Springer
14 years 11 months ago
Discovery of Exogenous Variables in Data with More Variables Than Observations
Many statistical methods have been proposed to estimate causal models in classical situations with fewer variables than observations. However, modern datasets including gene expres...
Yasuhiro Sogawa, Shohei Shimizu, Aapo Hyvärin...
BIOCOMP
2007
14 years 11 months ago
Prediction of trans-antisense Transcripts in Arabidopsis thaliana
Background: Natural antisense transcripts (NATs) are coding or non-coding RNAs with sequence complementarity to other transcripts (sense transcripts). These RNAs could potentially...
Huan Wang, Nam-Hai Chua, Xiu-Jie Wang
BMCBI
2006
113views more  BMCBI 2006»
14 years 10 months ago
GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima
Background: Computational discovery of transcription factor binding sites (TFBS) is a challenging but important problem of bioinformatics. In this study, improvement of a Gibbs sa...
Kazuhito Shida
CMSB
2009
Springer
15 years 1 months ago
Control Strategies for the Regulation of the Eukaryotic Heat Shock Response
Abstract. Elevated temperatures cause proteins in living cells to misfold. They start forming larger and larger aggregates that can eventually lead to the cell's death. The he...
Elena Czeizler, Eugen Czeizler, Ralph-Johan Back, ...