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» Modelling Gene Regulatory Networks
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BMCBI
2008
138views more  BMCBI 2008»
14 years 10 months ago
SynechoNET: integrated protein-protein interaction database of a model cyanobacterium Synechocystis sp. PCC 6803
Background: Cyanobacteria are model organisms for studying photosynthesis, carbon and nitrogen assimilation, evolution of plant plastids, and adaptability to environmental stresse...
Woo-Yeon Kim, Sungsoo Kang, Byoung-Chul Kim, Jeehy...
EVOW
2010
Springer
15 years 4 months ago
Grammatical Evolution Decision Trees for Detecting Gene-Gene Interactions
DEODHAR, SUSHAMNA DEODHAR. Using Grammatical Evolution Decision Trees for Detecting Gene-Gene Interactions in Genetic Epidemiology. (Under the direction of Dr. Alison Motsinger-Re...
Sushamna Deodhar, Alison A. Motsinger-Reif
IDA
2005
Springer
15 years 3 months ago
Bayesian Networks Learning for Gene Expression Datasets
DNA arrays yield a global view of gene expression and can be used to build genetic networks models, in order to study relations between genes. Literature proposes Bayesian network ...
Giacomo Gamberoni, Evelina Lamma, Fabrizio Riguzzi...
KDD
2005
ACM
130views Data Mining» more  KDD 2005»
15 years 10 months ago
Simple and effective visual models for gene expression cancer diagnostics
In the paper we show that diagnostic classes in cancer gene expression data sets, which most often include thousands of features (genes), may be effectively separated with simple ...
Gregor Leban, Minca Mramor, Ivan Bratko, Blaz Zupa...
BMCBI
2006
124views more  BMCBI 2006»
14 years 10 months ago
Predicting transcription factor binding sites using local over-representation and comparative genomics
Background: Identifying cis-regulatory elements is crucial to understanding gene expression, which highlights the importance of the computational detection of overrepresented tran...
Matthieu Defrance, Hélène Touzet