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HPCA
2006
IEEE
15 years 10 months ago
Last level cache (LLC) performance of data mining workloads on a CMP - a case study of parallel bioinformatics workloads
With the continuing growth in the amount of genetic data, members of the bioinformatics community are developing a variety of data-mining applications to understand the data and d...
Aamer Jaleel, Matthew Mattina, Bruce L. Jacob
HPCA
2005
IEEE
15 years 10 months ago
Using Virtual Load/Store Queues (VLSQs) to Reduce the Negative Effects of Reordered Memory Instructions
The use of large instruction windows coupled with aggressive out-oforder and prefetching capabilities has provided significant improvements in processor performance. In this paper...
Aamer Jaleel, Bruce L. Jacob
HPCA
2005
IEEE
15 years 10 months ago
Improving Multiple-CMP Systems Using Token Coherence
Improvements in semiconductor technology now enable Chip Multiprocessors (CMPs). As many future computer systems will use one or more CMPs and support shared memory, such systems ...
Michael R. Marty, Jesse D. Bingham, Mark D. Hill, ...
HPCA
2003
IEEE
15 years 10 months ago
Memory System Behavior of Java-Based Middleware
Java-based middleware, and application servers in particular, are rapidly gaining importance as a new class of workload for commercial multiprocessor servers. SPEC has recognized ...
Martin Karlsson, Kevin E. Moore, Erik Hagersten, D...
RECOMB
2008
Springer
15 years 10 months ago
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes
The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Sel...
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