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» Models and Methods in Comparative Genomics
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123
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BMCBI
2007
173views more  BMCBI 2007»
15 years 3 months ago
Ringo - an R/Bioconductor package for analyzing ChIP-chip readouts
Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is a high-throughput assay for DNA-protein-binding or post-translational chromatin/histone modi...
Joern Toedling, Oleg Sklyar, Tammo Krueger, Jenny ...
113
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BMCBI
2006
129views more  BMCBI 2006»
15 years 3 months ago
A literature-based similarity metric for biological processes
Background: Recent analyses in systems biology pursue the discovery of functional modules within the cell. Recognition of such modules requires the integrative analysis of genome-...
Monica Chagoyen, Pedro Carmona-Saez, Concha Gil, J...
ICASSP
2008
IEEE
15 years 10 months ago
Singer melody extraction in polyphonic signals using source separation methods
We propose a new approach for singer melody extraction, based on blind source separation techniques. The short time Fourier transform (STFT) of the singer signal is modelled by a ...
Jean-Louis Durrieu, Gaël Richard, Bertrand Da...
146
Voted
BMCBI
2008
201views more  BMCBI 2008»
15 years 3 months ago
A copula method for modeling directional dependence of genes
Background: Genes interact with each other as basic building blocks of life, forming a complicated network. The relationship between groups of genes with different functions can b...
Jong-Min Kim, Yoon-Sung Jung, Engin A. Sungur, Kap...
169
Voted
BMCBI
2011
14 years 10 months ago
A discriminative method for family-based protein remote homology detection that combines inductive logic programming and proposi
Background: Remote homology detection is a hard computational problem. Most approaches have trained computational models by using either full protein sequences or multiple sequenc...
Juliana S. Bernardes, Alessandra Carbone, Gerson Z...