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» Models and Methods in Comparative Genomics
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139
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BMCBI
2004
206views more  BMCBI 2004»
15 years 3 months ago
Combining gene expression data from different generations of oligonucleotide arrays
Background: One of the important challenges in microarray analysis is to take full advantage of previously accumulated data, both from one's own laboratory and from public re...
Kyu Baek Hwang, Sek Won Kong, Steven A. Greenberg,...
196
Voted
BIB
2011
14 years 7 months ago
Using cross-validation to evaluate predictive accuracy of survival risk classifiers based on high-dimensional data
Developments in whole genome biotechnology have stimulated statistical focus on prediction methods. We review here methodology for classifying patients into survival risk groups a...
Richard M. Simon, Jyothi Subramanian, Ming-Chung L...
175
Voted
BMCBI
2008
128views more  BMCBI 2008»
15 years 3 months ago
In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer
Background: The analysis of expressed sequence tags (EST) offers a rapid and cost effective approach to elucidate the transcriptome of an organism, but requires several computatio...
Shivashankar H. Nagaraj, Robin B. Gasser, Alasdair...
165
Voted
ECIR
2011
Springer
14 years 7 months ago
Combining Global and Local Semantic Contexts for Improving Biomedical Information Retrieval
In the context of biomedical information retrieval (IR), this paper explores the relationship between the document’s global context and the query’s local context in an attempt ...
Duy Dinh, Lynda Tamine
144
Voted
PRIB
2009
Springer
100views Bioinformatics» more  PRIB 2009»
15 years 10 months ago
Evidence-Based Clustering of Reads and Taxonomic Analysis of Metagenomic Data
Abstract. The rapidly emerging field of metagenomics seeks to examine the genomic content of communities of organisms to understand their roles and interactions in an ecosystem. I...
Gianluigi Folino, Fabio Gori, Mike S. M. Jetten, E...