We introduce a model of DNA sequence evolution which can account for biases in mutation rates that depend on the identity of the neighboring bases. An analytic solution for this c...
Recognition of a protein’s fold provides valuable information about its function. While many sequence-based homology prediction methods exist, an important challenge remains: tw...
Background: Microarrays have been used extensively to analyze the expression profiles for thousands of genes in parallel. Most of the widely used methods for analyzing Affymetrix ...
Alexander C. Cambon, Abdelnaby Khalyfa, Nigel G. F...
This paper presents a method to develop a class of variable memory Markov models that have higher memory capacity than traditional (uniform memory) Markov models. The structure of...
We give a new view on building content clusters from page pair models. We measure the heuristic importance within every two pages by computing the distance of their accessed positi...