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» Models and Methods in Comparative Genomics
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BMCBI
2008
117views more  BMCBI 2008»
15 years 4 months ago
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Background: The functional characterization of newly discovered proteins has been a challenge in the post-genomic era. Protein-protein interactions provide insights into the funct...
Young-Rae Cho, Lei Shi, Murali Ramanathan, Aidong ...
BMCBI
2006
127views more  BMCBI 2006»
15 years 4 months ago
Using local gene expression similarities to discover regulatory binding site modules
Background: We present an approach designed to identify gene regulation patterns using sequence and expression data collected for Saccharomyces cerevisae. Our main goal is to rela...
Bartek Wilczynski, Torgeir R. Hvidsten, Andriy Kry...
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BMCBI
2007
123views more  BMCBI 2007»
15 years 4 months ago
Robust clustering in high dimensional data using statistical depths
Background: Mean-based clustering algorithms such as bisecting k-means generally lack robustness. Although componentwise median is a more robust alternative, it can be a poor cent...
Yuanyuan Ding, Xin Dang, Hanxiang Peng, Dawn Wilki...
BMCBI
2010
125views more  BMCBI 2010»
14 years 11 months ago
ProbFAST: Probabilistic Functional Analysis System Tool
Background: The post-genomic era has brought new challenges regarding the understanding of the organization and function of the human genome. Many of these challenges are centered...
Israel T. da Silva, Ricardo Z. N. Vêncio, Th...
DATE
2006
IEEE
102views Hardware» more  DATE 2006»
15 years 10 months ago
A systematic IP and bus subsystem modeling for platform-based system design
The topic on platform-based system modeling has received a great deal of attention today. One of the important tasks that significantly affect the effectiveness and efficiency of ...
Junhyung Um, Woo-Cheol Kwon, Sungpack Hong, Young-...