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» Models and Methods in Comparative Genomics
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QEST
2010
IEEE
15 years 4 months ago
Rare Event Simulation for Highly Dependable Systems with Fast Repairs
Stochastic model checking has been used recently to assess, among others, dependability measures for a variety of systems. However, the employed numerical methods, as, e.g., suppor...
Daniël Reijsbergen, Pieter-Tjerk de Boer, Wer...
141
Voted
BMCBI
2010
101views more  BMCBI 2010»
15 years 6 months ago
Hidden Markov model speed heuristic and iterative HMM search procedure
Background: Profile hidden Markov models (profile-HMMs) are sensitive tools for remote protein homology detection, but the main scoring algorithms, Viterbi or Forward, require con...
L. Steven Johnson, Sean R. Eddy, Elon Portugaly
SIGGRAPH
2009
ACM
16 years 23 days ago
PCCD: parallel continuous collision detection
We present a novel parallel continuous collision detection (PCCD) method to utilize the widely available multi-core CPU architecture. Our method works with a wide variety of defor...
Duksu Kim, Jae-Pil Heo, Sung-Eui Yoon
BMCBI
2008
139views more  BMCBI 2008»
15 years 6 months ago
The C1C2: A framework for simultaneous model selection and assessment
Background: There has been recent concern regarding the inability of predictive modeling approaches to generalize to new data. Some of the problems can be attributed to improper m...
Martin Eklund, Ola Spjuth, Jarl E. S. Wikberg
CSDA
2007
126views more  CSDA 2007»
15 years 6 months ago
A consistent nonparametric Bayesian procedure for estimating autoregressive conditional densities
This article proposes a Bayesian infinite mixture model for the estimation of the conditional density of an ergodic time series. A nonparametric prior on the conditional density ...
Yongqiang Tang, Subhashis Ghosal