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» Models and Methods in Comparative Genomics
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BMCBI
2010
109views more  BMCBI 2010»
14 years 10 months ago
Predicting gene function using hierarchical multi-label decision tree ensembles
Background: S. cerevisiae, A. thaliana and M. musculus are well-studied organisms in biology and the sequencing of their genomes was completed many years ago. It is still a challe...
Leander Schietgat, Celine Vens, Jan Struyf, Hendri...
BMCBI
2005
104views more  BMCBI 2005»
14 years 9 months ago
Scoring functions for transcription factor binding site prediction
Background: Transcription factor binding site (TFBS) prediction is a difficult problem, which requires a good scoring function to discriminate between real binding sites and backg...
Markus T. Friberg, Peter von Rohr, Gaston H. Gonne...
BMCBI
2005
97views more  BMCBI 2005»
14 years 9 months ago
Evolutionary distance estimation and fidelity of pair wise sequence alignment
Background: Evolutionary distances are a critical measure in comparative genomics and molecular evolutionary biology. A simulation study was used to examine the effect of alignmen...
Michael S. Rosenberg
CCGRID
2010
IEEE
14 years 11 months ago
The Failure Trace Archive: Enabling Comparative Analysis of Failures in Diverse Distributed Systems
With the increasing functionality and complexity of distributed systems, resource failures are inevitable. While numerous models and algorithms for dealing with failures exist, th...
Derrick Kondo, Bahman Javadi, Alexandru Iosup, Dic...
FGCS
2006
113views more  FGCS 2006»
14 years 9 months ago
Performance feature identification by comparative trace analysis
This work introduces a method for instrumenting applications, producing execution traces, and visualizing multiple trace instances to identify performance features. The approach p...
Daniel P. Spooner, Darren J. Kerbyson