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104
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BMCBI
2007
116views more  BMCBI 2007»
15 years 19 days ago
Clustering protein environments for function prediction: finding PROSITE motifs in 3D
Background: Structural genomics initiatives are producing increasing numbers of threedimensional (3D) structures for which there is little functional information. Structure-based ...
Sungroh Yoon, Jessica C. Ebert, Eui-Young Chung, G...
130
Voted
BMCBI
2007
136views more  BMCBI 2007»
15 years 19 days ago
Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
Background: In vertebrates, a large part of gene transcriptional regulation is operated by cisregulatory modules. These modules are believed to be regulating much of the tissue-sp...
Xiaoyu Chen, Mathieu Blanchette
BMCBI
2007
141views more  BMCBI 2007»
15 years 19 days ago
Using structural motif descriptors for sequence-based binding site prediction
Background: Many protein sequences are still poorly annotated. Functional characterization of a protein is often improved by the identification of its interaction partners. Here, ...
Andreas Henschel, Christof Winter, Wan Kyu Kim, Mi...
124
Voted
BMCBI
2007
207views more  BMCBI 2007»
15 years 19 days ago
Analyzing in situ gene expression in the mouse brain with image registration, feature extraction and block clustering
Background: Many important high throughput projects use in situ hybridization and may require the analysis of images of spatial cross sections of organisms taken with cellular lev...
Manjunatha Jagalur, Chris Pal, Erik G. Learned-Mil...
92
Voted
IANDC
2006
77views more  IANDC 2006»
15 years 18 days ago
Lower and upper bounds on obtaining history independence
Abstract. History independent data structures, presented by Micciancio, are data structures that possess a strong security property: even if an intruder manages to get a copy of th...
Niv Buchbinder, Erez Petrank
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