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BMCBI
2006
104views more  BMCBI 2006»
15 years 1 months ago
MANET: tracing evolution of protein architecture in metabolic networks
Background: Cellular metabolism can be characterized by networks of enzymatic reactions and transport processes capable of supporting cellular life. Our aim is to find evolutionar...
Hee Shin Kim, Jay E. Mittenthal, Gustavo Caetano-A...
JCB
2006
185views more  JCB 2006»
15 years 1 months ago
A Probabilistic Methodology for Integrating Knowledge and Experiments on Biological Networks
Biological systems are traditionally studied by focusing on a specific subsystem, building an intuitive model for it, and refining the model using results from carefully designed ...
Irit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Sh...
ECOI
2007
80views more  ECOI 2007»
15 years 1 months ago
EcoLens: Integration and interactive visualization of ecological datasets
Complex multi-dimensional datasets are now pervasive in science and elsewhere in society. Better interactive tools are needed for visual data exploration so that patterns in such ...
Cynthia Sims Parr, Bongshin Lee, Benjamin B. Beder...
TOSEM
2008
168views more  TOSEM 2008»
15 years 1 months ago
Developing and debugging algebraic specifications for Java classes
Modern programs make extensive use of reusable software libraries. For example, a study of a number of large Java applications shows that between 17% and 30% of the classes in tho...
Johannes Henkel, Christoph Reichenbach, Amer Diwan
BMCBI
2004
112views more  BMCBI 2004»
15 years 1 months ago
MuTrack: a genome analysis system for large-scale mutagenesis in the mouse
Background: Modern biological research makes possible the comprehensive study and development of heritable mutations in the mouse model at high-throughput. Using techniques spanni...
Erich J. Baker, Leslie Galloway, Barbara Jackson, ...