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155
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BMCBI
2008
200views more  BMCBI 2008»
15 years 1 months ago
Defining functional distances over Gene Ontology
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...
Angela del Pozo, Florencio Pazos, Alfonso Valencia
117
Voted
BMCBI
2007
102views more  BMCBI 2007»
15 years 1 months ago
Understanding and using the meaning of statements in a bio-ontology: recasting the Gene Ontology in OWL
The bio-ontology community falls into two camps: first we have biology domain experts, who actually hold the knowledge we wish to capture in ontologies; second, we have ontology s...
Mikel Egaña Aranguren, Sean Bechhofer, Phil...
BMCBI
2008
102views more  BMCBI 2008»
15 years 1 months ago
PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships
Background: Phylogenies, i.e., the evolutionary histories of groups of taxa, play a major role in representing the interrelationships among biological entities. Many software tool...
Cuong Than, Derek A. Ruths, Luay Nakhleh
128
Voted
BMCBI
2008
111views more  BMCBI 2008»
15 years 1 months ago
A perl package and an alignment tool for phylogenetic networks
Background: Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of evolutionary events acting at the population level, like recombin...
Gabriel Cardona, Francesc Rosselló, Gabriel...
124
Voted
CORR
2008
Springer
96views Education» more  CORR 2008»
15 years 1 months ago
Improved Approximations for Multiprocessor Scheduling Under Uncertainty
This paper presents improved approximation algorithms for the problem of multiprocessor scheduling under uncertainty (SUU), in which the execution of each job may fail probabilist...
Christopher Y. Crutchfield, Zoran Dzunic, Jeremy T...