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BMCBI
2008
97views more  BMCBI 2008»
15 years 3 months ago
MCM-test: a fuzzy-set-theory-based approach to differential analysis of gene pathways
Background: Gene pathway can be defined as a group of genes that interact with each other to perform some biological processes. Along with the efforts to identify the individual g...
Lily R. Liang, Vinay Mandal, Yi Lu, Deepak Kumar
172
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BMCBI
2006
166views more  BMCBI 2006»
15 years 3 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
BMCBI
2006
122views more  BMCBI 2006»
15 years 3 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
142
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SIGKDD
2008
125views more  SIGKDD 2008»
15 years 3 months ago
Incremental pattern discovery on streams, graphs and tensors
Incremental pattern discovery targets streaming applications where the data continuously arrive incrementally. The questions are how to find patterns (main trends) incrementally; ...
Jimeng Sun
169
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BMCBI
2005
163views more  BMCBI 2005»
15 years 3 months ago
Alkahest NuclearBLAST: a user-friendly BLAST management and analysis system
Background -: Sequencing of EST and BAC end datasets is no longer limited to large research groups. Drops in per-base pricing have made high throughput sequencing accessible to in...
Stephen E. Diener, Thomas D. Houfek, Sam E. Kalat,...