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77
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CPM
2009
Springer
134views Combinatorics» more  CPM 2009»
15 years 5 months ago
Multiple Alignment of Biological Networks: A Flexible Approach
Yves-Pol Deniélou, Frédéric B...
RECOMB
2008
Springer
15 years 11 months ago
Fast and Accurate Alignment of Multiple Protein Networks
Comparative analysis of protein networks has proven to be a powerful approach for elucidating network structure and predicting protein function and interaction. A fundamental chall...
Maxim Kalaev, Vineet Bafna, Roded Sharan
100
Voted
AINA
2006
IEEE
15 years 5 months ago
Partitioned optimization algorithms for multiple sequence alignment
Multiple sequence alignment is an important and difficult problem in molecular biology and bioinformatics. In this paper, we propose a partitioning approach that significantly impr...
Yixin Chen, Yi Pan, Juan Chen, Wei Liu, Ling Chen
220
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RECOMB
2012
Springer
13 years 1 months ago
Estimating the Accuracy of Multiple Alignments and its Use in Parameter Advising
We develop a novel and general approach to estimating the accuracy of protein multiple sequence alignments without knowledge of a reference alignment, and use our approach to addre...
Dan F. DeBlasio, Travis J. Wheeler, John D. Kececi...
ICNSC
2008
IEEE
15 years 5 months ago
Multiple Sequence Alignment Based on Genetic Algorithms with Reserve Selection
— This paper presents an approach to the multiple sequence alignment (MSA) problem by applying genetic algorithms with a reserve selection mechanism. MSA is one of the most funda...
Yang Chen, Jinglu Hu, Kotaro Hirasawa, Songnian Yu