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110
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BMCBI
2007
77views more  BMCBI 2007»
15 years 3 months ago
The reactive metabolite target protein database (TPDB) - a web-accessible resource
Background: The toxic effects of many simple organic compounds stem from their biotransformation to chemically reactive metabolites which bind covalently to cellular proteins. To ...
Robert P. Hanzlik, Yakov M. Koen, Bhargav Theertha...
160
Voted
TSP
2008
167views more  TSP 2008»
15 years 2 months ago
Multi-Task Learning for Analyzing and Sorting Large Databases of Sequential Data
A new hierarchical nonparametric Bayesian framework is proposed for the problem of multi-task learning (MTL) with sequential data. The models for multiple tasks, each characterize...
Kai Ni, John William Paisley, Lawrence Carin, Davi...
194
Voted
BMCBI
2011
14 years 7 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
117
Voted
NAR
2006
74views more  NAR 2006»
15 years 3 months ago
NOPdb: Nucleolar Proteome Database
The Nucleolar Proteome Database (NOPdb) archives data on .700 proteins that were identified by multiple mass spectrometry (MS) analyses from highly purified preparations of human ...
Anthony Kar Lun Leung, Laura Trinkle-Mulcahy, Yun ...
310
Voted
CIDR
2011
401views Algorithms» more  CIDR 2011»
14 years 7 months ago
DBease: Making Databases User-Friendly and Easily Accessible
Structured query language (SQL) is a classical way to access relational databases. Although SQL is powerful to query relational databases, it is rather hard for inexperienced user...
Guoliang Li, Ju Fan, Hao Wu, Jiannan Wang, Jianhua...