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RECOMB
2003
Springer
16 years 7 months ago
Phylogenetically and spatially conserved word pairs associated with gene expression changes in yeasts
Background: Transcriptional regulation in eukaryotes often involves multiple transcription factors binding to the same transcription control region, and to understand the regulato...
Derek Y. Chiang, Alan M. Moses, Manolis Kamvysseli...
RECOMB
2003
Springer
16 years 7 months ago
Accurate detection of very sparse sequence motifs
Protein sequence alignments are more reliable the shorter the evolutionary distance. Here, we align distantly related proteins using many closely spaced intermediate sequences as ...
Andreas Heger, Michael Lappe, Liisa Holm
STOC
2006
ACM
129views Algorithms» more  STOC 2006»
16 years 7 months ago
Optimal phylogenetic reconstruction
One of the major tasks of evolutionary biology is the reconstruction of phylogenetic trees from molecular data. The evolutionary model is given by a Markov chain on the true evolu...
Constantinos Daskalakis, Elchanan Mossel, Sé...
STOC
2003
ACM
90views Algorithms» more  STOC 2003»
16 years 7 months ago
Work-competitive scheduling for cooperative computing with dynamic groups
The problem of cooperatively performing a set of t tasks in a decentralized setting where the computing medium is subject to failures is one of the fundamental problems in distrib...
Chryssis Georgiou, Alexander Russell, Alexander A....
OSDI
2008
ACM
16 years 7 months ago
Automating Network Application Dependency Discovery: Experiences, Limitations, and New Solutions
Abstract ? Large enterprise networks consist of thousands of services and applications. The performance and reliability of any particular application may depend on multiple service...
Xu Chen, Ming Zhang, Zhuoqing Morley Mao, Paramvir...
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