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» Multiple Sequence Alignment Using Reconfigurable Computing
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MVA
2008
131views Computer Vision» more  MVA 2008»
14 years 9 months ago
Frame-level temporal calibration of video sequences from unsynchronized cameras
This paper describes a new method for temporally calibrating multiple cameras by image processing operations. Existing multi-camera algorithms assume that the input sequences are ...
Senem Velipasalar, Wayne Wolf
BIBM
2007
IEEE
132views Bioinformatics» more  BIBM 2007»
15 years 4 months ago
A Divide-and-Conquer Implementation of Three Sequence Alignment and Ancestor Inference
In this paper, we present an algorithm to simultaneously align three biological sequences with affine gap model and infer their common ancestral sequence. Our algorithm can be fu...
Feng Yue, Jijun Tang
BMCBI
2006
116views more  BMCBI 2006»
14 years 9 months ago
TaxMan: a taxonomic database manager
Background: Phylogenetic analysis of large, multiple-gene datasets, assembled from public sequence databases, is rapidly becoming a popular way to approach difficult phylogenetic ...
Martin Jones, Mark Blaxter
NAR
2006
61views more  NAR 2006»
14 years 9 months ago
MAVL/StickWRLD: analyzing structural constraints using interpositional dependencies in biomolecular sequence alignments
The increasing availability of structurally aligned protein families has made it possible to use statistical methods to discover regions of interpositional dependenciesof residue ...
Hatice Gulcin Ozer, William C. Ray
BIBE
2005
IEEE
124views Bioinformatics» more  BIBE 2005»
15 years 3 months ago
Approximate Global Alignment of Sequences
We propose two novel dynamic programming (DP) methods that solve the the approximate bounded and unbounded global alignment problems for biological sequences. Our first method so...
Tamer Kahveci, Venkatakrishnan Ramaswamy, Han Tao,...