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» Multiple Sequence Alignment Using Reconfigurable Computing
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CPM
2006
Springer
112views Combinatorics» more  CPM 2006»
15 years 1 months ago
Local Alignment of RNA Sequences with Arbitrary Scoring Schemes
Abstract. Local similarity is an important tool in comparative analysis of biological sequences, and is therefore well studied. In particular, the Smith-Waterman technique and its ...
Rolf Backofen, Danny Hermelin, Gad M. Landau, Oren...
BMCBI
2006
111views more  BMCBI 2006»
14 years 9 months ago
Tools for integrated sequence-structure analysis with UCSF Chimera
Background: Comparing related structures and viewing the structures in the context of sequence alignments are important tasks in protein structure-function research. While many pr...
Elaine C. Meng, Eric F. Pettersen, Gregory S. Couc...
ISAAC
2004
Springer
114views Algorithms» more  ISAAC 2004»
15 years 3 months ago
Structural Alignment of Two RNA Sequences with Lagrangian Relaxation
RNA is generally a single-stranded molecule where the bases form hydrogen bonds within the same molecule leading to structure formation. In comparing different homologous RNA mole...
Markus Bauer, Gunnar W. Klau
COMPLIFE
2005
Springer
15 years 3 months ago
Fast and Accurate Structural RNA Alignment by Progressive Lagrangian Optimization
During the last few years new functionalities of RNA have been discovered, renewing the need for computational tools for their analysis. To this respect, multiple sequence alignmen...
Markus Bauer, Gunnar W. Klau, Knut Reinert
CVPR
2012
IEEE
13 years 2 days ago
Multi-video browsing and summarization
We propose a method for browsing multiple videos with a common theme, such as the result of a search query on a video sharing website, or videos of an event covered by multiple ca...
Kevin Dale, Eli Shechtman, Shai Avidan, Hanspeter ...