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    » Multiple Sequence Alignment Using Reconfigurable Computing
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    BMCBI
    2005
    152views more  BMCBI 2005»
    Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
    14 years 9 months ago
    Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
    Download  www.biomedcentral.com
    Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
    Markus Wistrand, Erik L. L. Sonnhammer
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    TCSV
    2010
    161views Computational Biology» more  TCSV 2010»
    Near Duplicate Identification With Spatially Aligned Pyramid Matching
    14 years 4 months ago
    Near Duplicate Identification With Spatially Aligned Pyramid Matching
    Download  vc.sce.ntu.edu.sg
    Abstract--A new framework, termed Spatially Aligned Pyramid Matching (SAPM), is proposed for Near Duplicate Image Identification. The proposed method robustly handles spatial shift...
    Dong Xu, Tat-Jen Cham, Shuicheng Yan, Lixin Duan, ...
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    ANOR
    2010
    125views more  ANOR 2010»
    A Bayesian approach for the alignment of high-resolution NMR spectra
    14 years 10 months ago
    A Bayesian approach for the alignment of high-resolution NMR spectra
    Download  ieweb.uta.edu
    : The rapid progresses in human genome project and biotechnologies result in the sheer volume of datasets associated with in-depth scientific knowledge. Metabolomics is defined as ...
    Seoung Bum Kim, Zhou Wang, Basavaraj Hiremath
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    NAR
    2006
    107views more  NAR 2006»
    CorGen - measuring and generating long-range correlations for DNA sequence analysis
    14 years 9 months ago
    CorGen - measuring and generating long-range correlations for DNA sequence analysis
    Download  evogen.molgen.mpg.de
    CorGen is a web server that measures long-range correlations in the base composition of DNA and generates random sequences with the same correlation parameters. Long-range correla...
    Philipp W. Messer, Peter F. Arndt
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    WABI
    2009
    Springer
    128views Bioinformatics» more  WABI 2009»
    A General Framework for Local Pairwise Alignment Statistics with Gaps
    15 years 4 months ago
    A General Framework for Local Pairwise Alignment Statistics with Gaps
    Download  www.cs.helsinki.fi
    We present a novel dynamic programming framework that allows one to compute tight upper bounds for the p-values of gapped local alignments in pseudo–polynomial time. Our algorith...
    Pasi Rastas
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