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» Multiple Sequence Alignment Using Reconfigurable Computing
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FCCM
2002
IEEE
171views VLSI» more  FCCM 2002»
15 years 2 months ago
Coarse-Grain Pipelining on Multiple FPGA Architectures
Reconfigurable systems, and in particular, FPGA-based custom computing machines, offer a unique opportunity to define application-specific architectures. These architectures offer...
Heidi E. Ziegler, Byoungro So, Mary W. Hall, Pedro...
CIVR
2009
Springer
212views Image Analysis» more  CIVR 2009»
15 years 4 months ago
Video copy detection by fast sequence matching
Sequence matching techniques are effective for comparing two videos. However, existing approaches suffer from demanding computational costs and thus are not scalable for large-sca...
Mei-Chen Yeh, Kwang-Ting Cheng
BMCBI
2007
142views more  BMCBI 2007»
14 years 9 months ago
SABERTOOTH: protein structural alignment based on a vectorial structure representation
Background: The task of computing highly accurate structural alignments of proteins in very short computation time is still challenging. This is partly due to the complexity of pr...
Florian Teichert, Ugo Bastolla, Markus Porto
BMCBI
2011
14 years 4 months ago
Bio: : Phylo - phyloinformatic analysis using Perl
Background: Phyloinformatic analyses involve large amounts of data and metadata of complex structure. Collecting, processing, analyzing, visualizing and summarizing these data and...
Rutger A. Vos, Jason Caravas, Klaas Hartmann, Mark...
BMCBI
2006
129views more  BMCBI 2006»
14 years 9 months ago
EGenBio: A Data Management System for Evolutionary Genomics and Biodiversity
Background: Evolutionary genomics requires management and filtering of large numbers of diverse genomic sequences for accurate analysis and inference on evolutionary processes of ...
Laila A. Nahum, Matthew T. Reynolds, Zhengyuan O. ...