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CCE
2008
15 years 2 months ago
Multiobjective optimization of multipurpose batch plants using superequipment class concept
We present a novel approach for solving different design problems related to single products in multipurpose batch plants: the selection of one production line out of several avai...
Andrej Mosat, Laurent Cavin, Ulrich Fischer 0002, ...
ISMB
1997
15 years 3 months ago
Automated Alignment of RNA Sequences to Pseudoknotted Structures
Seq7 is a newprogramfor generating multiple structure-based alignments of RNAsequences. Byusing a variant of Dijkstra’s algorithm to find the shortest path through a specially c...
Jack E. Tabaska, Gary D. Stormo
DCC
2009
IEEE
16 years 2 months ago
Source Coding Scheme for Multiple Sequence Alignments
Rapid development of DNA sequencing technologies exponentially increases the amount of publicly available genomic data. Whole genome multiple sequence alignments represent a parti...
Pavol Hanus, Janis Dingel, Georg Chalkidis, Joachi...
101
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CPM
1998
Springer
115views Combinatorics» more  CPM 1998»
15 years 6 months ago
Aligning Alignments
d abstract) John Kececioglu and Dean Starrett Department of Computer Science The University of Arizona Tucson AZ 85721, USA A basic computational problem that arises in both the...
John D. Kececioglu, Weiqing Zhang
ISCAPDCS
2007
15 years 3 months ago
PARALLEL-TCOFFEE: A parallel multiple sequence aligner
In this paper we present a parallel implementation of T–Coffee — a widely used multiple sequence alignment package. Our software supports a majority of options provided by the...
Jaroslaw Zola, Xiao Yang, Adrian Rospondek, Sriniv...