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» Multiple Sequence Alignment Using Tabu Search
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BMCBI
2006
172views more  BMCBI 2006»
14 years 12 months ago
Prediction of cis/trans isomerization in proteins using PSI-BLAST profiles and secondary structure information
Background: The majority of peptide bonds in proteins are found to occur in the trans conformation. However, for proline residues, a considerable fraction of Prolyl peptide bonds ...
Jiangning Song, Kevin Burrage, Zheng Yuan, Thomas ...
WABI
2007
Springer
102views Bioinformatics» more  WABI 2007»
15 years 6 months ago
Homology Search with Fragmented Nucleic Acid Sequence Patterns
The comprehensive annotation of non-coding RNAs in newly sequenced genomes is still a largely unsolved problem because many functional RNAs exhibit not only poorly conserved sequen...
Axel Mosig, Julian J.-L. Chen, Peter F. Stadler
BMCBI
2004
150views more  BMCBI 2004»
14 years 11 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz
MVA
2008
131views Computer Vision» more  MVA 2008»
14 years 11 months ago
Frame-level temporal calibration of video sequences from unsynchronized cameras
This paper describes a new method for temporally calibrating multiple cameras by image processing operations. Existing multi-camera algorithms assume that the input sequences are ...
Senem Velipasalar, Wayne Wolf
RECOMB
2006
Springer
16 years 6 days ago
Structural Alignment of Pseudoknotted RNA
In this paper, we address the problem of discovering novel non-coding RNA (ncRNA) using primary sequence, and secondary structure conservation, focusing on ncRNA families with pseu...
Banu Dost, Buhm Han, Shaojie Zhang, Vineet Bafna