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GCB
2000
Springer
137views Biometrics» more  GCB 2000»
15 years 3 months ago
Detecting Sporadic Recombination in DNA Alignments with Hidden Markov Models
Conventional phylogenetic tree estimation methods assume that all sites in a DNA multiple alignment have the same evolutionary history. This assumption is violated in data sets fro...
Dirk Husmeier, Frank Wright
PAMI
2008
146views more  PAMI 2008»
14 years 11 months ago
Video Event Recognition Using Kernel Methods with Multilevel Temporal Alignment
In this work, we systematically study the problem of event recognition in unconstrained news video sequences. We adopt the discriminative kernel-based method for which video clip s...
Dong Xu, Shih-Fu Chang
BMCBI
2005
169views more  BMCBI 2005»
14 years 11 months ago
MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes
Background: Cis-regulatory modules are combinations of regulatory elements occurring in close proximity to each other that control the spatial and temporal expression of genes. Th...
Voichita D. Marinescu, Isaac S. Kohane, Alberto Ri...
CVPR
2007
IEEE
15 years 6 months ago
Visual Event Recognition in News Video using Kernel Methods with Multi-Level Temporal Alignment
In this work, we systematically study the problem of visual event recognition in unconstrained news video sequences. We adopt the discriminative kernel-based method for which vide...
Dong Xu, Shih-Fu Chang
IPPS
2008
IEEE
15 years 6 months ago
SWAMP: Smith-Waterman using associative massive parallelism
One of the most commonly used tools by computational biologists is some form of sequence alignment. Heuristic alignment algorithms developed for speed and their multiple results s...
Shannon Steinfadt, Johnnie W. Baker