Sciweavers

41 search results - page 4 / 9
» Multiple Structural RNA Alignment with Lagrangian Relaxation
Sort
View
126
Voted
SSDBM
2007
IEEE
131views Database» more  SSDBM 2007»
15 years 10 months ago
Mining RNA Tertiary Motifs with Structure Graphs
We present a novel application of graph database mining to identify tertiary motifs in RNA structures. In od, we abstract an RNA molecule as a labeled graph and use a frequent sub...
Xueyi Wang, Jun Huan, Jack Snoeyink, Wei Wang 0010
138
Voted
BMCBI
2007
153views more  BMCBI 2007»
15 years 3 months ago
Can Clustal-style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?
Background: In ribonucleic acid (RNA) molecules whose function depends on their final, folded three-dimensional shape (such as those in ribosomes or spliceosome complexes), the se...
Amelia B. Bellamy-Royds, Marcel Turcotte
142
Voted
CPM
2006
Springer
145views Combinatorics» more  CPM 2006»
15 years 7 months ago
Approximation of RNA Multiple Structural Alignment
Abstract. In the context of non-coding RNA (ncRNA) multiple structural alignment, Davydov and Batzoglou introduced in [7] the problem of finding the largest nested linear graph tha...
Marcin Kubica, Romeo Rizzi, Stéphane Vialet...
84
Voted
BIOINFORMATICS
2007
33views more  BIOINFORMATICS 2007»
15 years 3 months ago
Murlet: a practical multiple alignment tool for structural RNA sequences
Hisanori Kiryu, Yasuo Tabei, Taishin Kin, Kiyoshi ...