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» Multiple alignment by aligning alignments
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125
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ICARCV
2006
IEEE
270views Robotics» more  ICARCV 2006»
15 years 9 months ago
Expansion of Hager Belhumeur Inverse Additive Algorithm to Homographies
— Image alignment is a widely used technique in computer vision, and it can be applied to many areas such as image registration and region tracking. Hager and Belhumeur proposed ...
Hyun Seok Hong, Myung Jin Chung
239
Voted
CSB
2004
IEEE
208views Bioinformatics» more  CSB 2004»
15 years 7 months ago
Pair Stochastic Tree Adjoining Grammars for Aligning and Predicting Pseudoknot RNA Structures
Motivation: Since the whole genome sequences for many species are currently available, computational predictions of RNA secondary structures and computational identifications of t...
Hiroshi Matsui, Kengo Sato, Yasubumi Sakakibara
115
Voted
BMCBI
2010
113views more  BMCBI 2010»
15 years 3 months ago
Efficient protein alignment algorithm for protein search
Background: Proteins show a great variety of 3D conformations, which can be used to infer their evolutionary relationship and to classify them into more general groups; therefore ...
Zaixin Lu, Zhiyu Zhao, Bin Fu
95
Voted
BMCBI
2007
152views more  BMCBI 2007»
15 years 3 months ago
A cross-species alignment tool (CAT)
Background: The main two sorts of automatic gene annotation frameworks are ab initio and alignment-based, the latter splitting into two sub-groups. The first group is used for int...
Heng Li, Liang Guan, Tao Liu, Yiran Guo, Wei-Mou Z...
132
Voted
BMCBI
2006
120views more  BMCBI 2006»
15 years 3 months ago
Optimizing amino acid substitution matrices with a local alignment kernel
Background: Detecting remote homologies by direct comparison of protein sequences remains a challenging task. We had previously developed a similarity score between sequences, cal...
Hiroto Saigo, Jean-Philippe Vert, Tatsuya Akutsu