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» Multiple alignment by aligning alignments
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131
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BIBM
2008
IEEE
141views Bioinformatics» more  BIBM 2008»
15 years 10 months ago
Protein-Protein Interaction Network Alignment by Quantitative Simulation
We adapt a network simulation algorithm called quantitative simulation (QSim) for use in the alignment of biological networks. Unlike most network alignment methods, QSim finds l...
Perry Evans, Ted Sandler, Lyle H. Ungar
118
Voted
GEOS
2007
Springer
15 years 9 months ago
Structure-Based Methods to Enhance Geospatial Ontology Alignment
In geospatial applications with heterogeneous classification schemes that describe related domains, an ontology-driven approach to data sharing and interoperability relies on the ...
William Sunna, Isabel F. Cruz
114
Voted
SLIP
2006
ACM
15 years 9 months ago
Statistical crosstalk aggressor alignment aware interconnect delay calculation
Crosstalk aggressor alignment induces significant interconnect delay variation and needs to be taken into account in a statistical timer. In this paper, we approximate crosstalk ...
Andrew B. Kahng, Bao Liu, Xu Xu
143
Voted
RIDE
1998
IEEE
15 years 8 months ago
Generating Hypermedia Documents from Transcriptions of Television Programs Using Parallel Text Alignment
This paper presents a method of automatically creating hypermedia documents from conventional transcriptions of television programs. Using parallel text alignment techniques, the ...
David C. Gibbon
155
Voted
RECOMB
1998
Springer
15 years 7 months ago
Alignments without low-scoring regions
Given a strong match between regions of two sequences, how far can the match be meaningfully extended if gaps are allowed in the resulting alignment? The aim is to avoid searching...
Zheng Zhang 0004, Piotr Berman, Webb Miller