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121
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BMCBI
2008
106views more  BMCBI 2008»
15 years 3 months ago
Searching for evolutionary distant RNA homologs within genomic sequences using partition function posterior probabilities
Background: Identification of RNA homologs within genomic stretches is difficult when pairwise sequence identity is low or unalignable flanking residues are present. In both cases...
Usman Roshan, Satish Chikkagoudar, Dennis R. Lives...
123
Voted
MICCAI
2004
Springer
16 years 4 months ago
: Multi-subject Registration for Unbiased Statistical Atlas Construction
This paper introduces a new similarity measure designed to bring a population of segmented subjects into alignment in a common coordinate system. Our metric aligns each subject wit...
Mathieu De Craene, Aloys du Bois d'Aische, Beno&ic...
136
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SEMWEB
2009
Springer
15 years 10 months ago
ASMOV: Results for OAEI 2009
The Automated Semantic Mapping of Ontologies with Validation (ASMOV) algorithm for ontology alignment was one of the top performing algorithms in the 2007 and 2008 Ontology Alignme...
Yves R. Jean-Mary, E. Patrick Shironoshita, Mansur...
144
Voted
DATESO
2007
157views Database» more  DATESO 2007»
15 years 5 months ago
Index-Based Approach to Similarity Search in Protein and Nucleotide Databases
When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
David Hoksza, Tomás Skopal
192
Voted
BMCBI
2011
14 years 7 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes