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ISMB
1997
15 years 5 months ago
Bayesian Adaptive Alignment and Inference
Sequencealignmentwithoutthe specification of gap penaltiesor a scoringmatrixis attainedbyusing Bayesianinferenceanda recursivealgorithm.Thisprocedure’srecursivealgorithmsumsover...
Jun Zhu, Jun S. Liu, Charles E. Lawrence
ACTAC
2008
145views more  ACTAC 2008»
15 years 3 months ago
Sentence Alignment of Hungarian-English Parallel Corpora Using a Hybrid Algorithm
We present an ecient hybrid method for aligning sentences with their translations in a parallel bilingual corpus. The new algorithm is composed of a length-based and anchor matchi...
Krisztina Tóth, Richárd Farkas, Andr...
BMCBI
2010
126views more  BMCBI 2010»
15 years 3 months ago
Cgaln: fast and space-efficient whole-genome alignment
Background: Whole-genome sequence alignment is an essential process for extracting valuable information about the functions, evolution, and peculiarities of genomes under investig...
Ryuichiro Nakato, Osamu Gotoh
BMCBI
2007
183views more  BMCBI 2007»
15 years 3 months ago
Considerations in the identification of functional RNA structural elements in genomic alignments
Background: Accurate identification of novel, functional noncoding (nc) RNA features in genome sequence has proven more difficult than for exons. Current algorithms identify and s...
Tomas Babak, Benjamin J. Blencowe, Timothy R. Hugh...
BMCBI
2008
119views more  BMCBI 2008»
15 years 3 months ago
A new method for 2D gel spot alignment: application to the analysis of large sample sets in clinical proteomics
Background: In current comparative proteomics studies, the large number of images generated by 2D gels is currently compared using spot matching algorithms. Unfortunately, differe...
Sabine Pérès, Laurence Molina, Nicol...