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» Multiple alignment by aligning alignments
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AVSS
2005
IEEE
15 years 9 months ago
View registration using interesting segments of planar trajectories
We introduce a method for recovering the spatial and temporal alignment between two or more views of objects moving over a ground plane. Existing approaches either assume that the...
Walter Nunziati, Jonathan Alon, Stan Sclaroff, Alb...
NAACL
2004
15 years 5 months ago
What's in a translation rule?
We propose a theory that gives formal semantics to word-level alignments defined over parallel corpora. We use our theory to introduce a linear algorithm that can be used to deriv...
Michel Galley, Mark Hopkins, Kevin Knight, Daniel ...
BMCBI
2010
137views more  BMCBI 2010»
15 years 4 months ago
BS Seeker: precise mapping for bisulfite sequencing
Background: Bisulfite sequencing using next generation sequencers yields genome-wide measurements of DNA methylation at single nucleotide resolution. Traditional aligners are not ...
Pao-Yang Chen, Shawn Cokus, Matteo Pellegrini
BMCBI
2006
111views more  BMCBI 2006»
15 years 4 months ago
Using ESTs to improve the accuracy of de novo gene prediction
Background: ESTs are a tremendous resource for determining the exon-intron structures of genes, but even extensive EST sequencing tends to leave many exons and genes untouched. Ge...
Chaochun Wei, Michael R. Brent
BMCBI
2006
111views more  BMCBI 2006»
15 years 4 months ago
Tools for integrated sequence-structure analysis with UCSF Chimera
Background: Comparing related structures and viewing the structures in the context of sequence alignments are important tasks in protein structure-function research. While many pr...
Elaine C. Meng, Eric F. Pettersen, Gregory S. Couc...