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    BMCBI
    2008
    138views more  BMCBI 2008»
    Application of nonnegative matrix factorization to improve profile-profile alignment features for fold recognition and remote ho
    14 years 11 months ago
    Application of nonnegative matrix factorization to improve profile-profile alignment features for fold recognition and remote ho
    Download  www.biomedcentral.com
    Background: Nonnegative matrix factorization (NMF) is a feature extraction method that has the property of intuitive part-based representation of the original features. This uniqu...
    Inkyung Jung, Jaehyung Lee, Soo-Young Lee, Dongsup...
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    BMCBI
    2008
    211views more  BMCBI 2008»
    CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
    14 years 11 months ago
    CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
    Download  www.biomedcentral.com
    Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
    Svetlin Manavski, Giorgio Valle
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    USENIX
    2008
    107views Operating System» more  USENIX 2008»
    A Linux Implementation Validation of Track-Aligned Extents and Track-Aligned RAIDs
    15 years 1 months ago
    A Linux Implementation Validation of Track-Aligned Extents and Track-Aligned RAIDs
    Download  www.cs.fsu.edu
    Through clean-slate implementation of two storage optimizations--track-aligned extents and track-aligned RAIDs--this paper shows the values of independent validations. The experie...
    Jin Qian, Christopher R. Meyers, An-I Andy Wang
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    APBC
    2006
    125views Bioinformatics» more  APBC 2006»
    AlignScope: A Visual Mining Tool for Gene Team Finding with Whole Genome Alignment
    15 years 14 days ago
    AlignScope: A Visual Mining Tool for Gene Team Finding with Whole Genome Alignment
    Download  www.comp.nus.edu.sg
    Hee-Jeong Jin, Hye-Jung Kim, Jeong-Hyeon Choi, Hwa...
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    BMCBI
    2008
    85views more  BMCBI 2008»
    Fr-TM-align: a new protein structural alignment method based on fragment alignments and the TM-score
    14 years 11 months ago
    Fr-TM-align: a new protein structural alignment method based on fragment alignments and the TM-score
    Download  cssb.biology.gatech.edu
    Shashi Bhushan Pandit, Jeffrey Skolnick
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