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» Multiple alignment by aligning alignments
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124
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BIBE
2005
IEEE
124views Bioinformatics» more  BIBE 2005»
15 years 9 months ago
Approximate Global Alignment of Sequences
We propose two novel dynamic programming (DP) methods that solve the the approximate bounded and unbounded global alignment problems for biological sequences. Our first method so...
Tamer Kahveci, Venkatakrishnan Ramaswamy, Han Tao,...
139
Voted
BIBE
2005
IEEE
126views Bioinformatics» more  BIBE 2005»
15 years 9 months ago
Suboptimal Alignments Improve the Detection of Weak Homologs in Sequence Database Searches
PSI-BLAST remains one of the popular tools for searching remote homologs in sequence databases. We recently demonstrated that hybrid alignment can function as the alignment core f...
Yuheng Li, Mario Lauria, Ralf Bundschuh
ACL
2006
15 years 5 months ago
Word Alignment for Languages with Scarce Resources Using Bilingual Corpora of Other Language Pairs
This paper proposes an approach to improve word alignment for languages with scarce resources using bilingual corpora of other language pairs. To perform word alignment between la...
Haifeng Wang, Hua Wu, Zhan-yi Liu
99
Voted
MT
1998
69views more  MT 1998»
15 years 3 months ago
Bilingual Sentence Alignment: Balancing Robustness and Accuracy
Sentence alignment is the problem of making explicit the relations that exist between the sentences of two texts that are known to be mutual translations. Automatic sentence align...
Michel Simard, Pierre Plamondon
124
Voted
CSB
2003
IEEE
128views Bioinformatics» more  CSB 2003»
15 years 9 months ago
Degenerate Primer Design via Clustering
This paper describes a new strategy for designing degenerate primers for a given multiple alignment of amino acid sequences. Degenerate primers are useful for amplifying homologou...
Xintao Wei, David N. Kuhn, Giri Narasimhan