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» Multiple alignment by aligning alignments
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151
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BMCBI
2004
126views more  BMCBI 2004»
15 years 3 months ago
A probabilistic model for the evolution of RNA structure
Background: For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements in multiple-genome datasets, it is useful to be able to derive multi-sequence ...
Ian Holmes
142
Voted
CIKM
2005
Springer
15 years 9 months ago
ViPER: augmenting automatic information extraction with visual perceptions
In this paper we address the problem of unsupervised Web data extraction. We show that unsupervised Web data extraction becomes feasible when supposing pages that are made up of r...
Kai Simon, Georg Lausen
RECOMB
2006
Springer
16 years 3 months ago
CONTRAlign: Discriminative Training for Protein Sequence Alignment
In this paper, we present CONTRAlign, an extensible and fully automatic framework for parameter learning and protein pairwise sequence alignment using pair conditional random field...
Chuong B. Do, Samuel S. Gross, Serafim Batzoglou
SEMWEB
2009
Springer
15 years 10 months ago
Using Ontology Alignment to Dynamically Chain Web Services
This statement of interest presents a brief rationale and description of issues for using ontology alignment as a key step in dynamically chaining together a sequence of web servic...
Dru McCandless, Leo Obrst
AINA
2008
IEEE
15 years 10 months ago
Introducing Variable Gap Penalties into Three-Sequence Alignment for Protein Sequences
The common-use gap penalty strategies, constant penalty and affine gap penalty, have been adopted in the traditional three-sequence alignment algorithm which considers the inserti...
Che-Lun Hung, Chun-Yuan Lin, Yeh-Ching Chung, Chua...