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» Multiple sequence alignment by quantum genetic algorithm
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CVPR
1997
IEEE
15 years 3 months ago
True Multi-Image Alignment and its Application to Mosaicing and Lens Distortion Correction
Multiple images of a scene are related through 20/3D view transformations and linear and non-linear camera transformations. In all the traditional techniques to compute these tran...
Harpreet S. Sawhney, Rakesh Kumar
COMAD
2008
15 years 1 months ago
REBMEC: Repeat Based Maximum Entropy Classifier for Biological Sequences
An important problem in biological data analysis is to predict the family of a newly discovered sequence like a protein or DNA sequence, using the collection of available sequence...
Pratibha Rani, Vikram Pudi
BMCBI
2008
114views more  BMCBI 2008»
14 years 11 months ago
Dinucleotide controlled null models for comparative RNA gene prediction
Background: Comparative prediction of RNA structures can be used to identify functional noncoding RNAs in genomic screens. It was shown recently by Babak et al. [BMC Bioinformatic...
Tanja Gesell, Stefan Washietl
SASP
2009
IEEE
291views Hardware» more  SASP 2009»
15 years 6 months ago
A parameterisable and scalable Smith-Waterman algorithm implementation on CUDA-compatible GPUs
—This paper describes a multi-threaded parallel design and implementation of the Smith-Waterman (SM) algorithm on compute unified device architecture (CUDA)-compatible graphic pr...
Cheng Ling, Khaled Benkrid, Tsuyoshi Hamada
BMCBI
2004
150views more  BMCBI 2004»
14 years 11 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz